ZFIN ID: ZDB-GENE-090511-2
Gene Name: bloodthirsty-related gene family, member 1
Gene Symbol: btr01    Nomenclature History

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Previous Name: trim21 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have zinc ion binding activity. Involved in response to hypoxia. Is expressed in head. Orthologous to human TRIM49C (tripartite motif containing 49C) and TRIM60 (tripartite motif containing 60).
Genome Resources: Alliance (1),  Gene:563047 (1),  Ensembl(GRCz11):ENSDARG00000051965 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Manchenkov et al., 2015
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021223Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14479 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19552 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32738 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39670 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-btr01 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH btr01 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH btr01 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to hypoxia (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA btr01-202 (1)    Ensembl 448
    btr01-203 (1)    Ensembl 379
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM btr01 No data available
    MARKER RELATIONSHIPS
    btr01 Contained in: [BAC] CH211-151P13 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_686415 (1) 1981 nt
    Genomic GenBank:CU929294 (1) 165682 nt
    Select Tool
    Polypeptide UniProtKB:F1QYX5 (1) 582 aa
    Sequence Information (all 8)
    ORTHOLOGY for btr01 ( Chr: 1 )
    CITATIONS (21)