ZFIN is now using GRCz12tu for Genomic Data
Gene
phf3
- ID
- ZDB-GENE-090313-207
- Name
- PHD finger protein 3
- Symbol
- phf3 Nomenclature History
- Previous Names
-
- si:dkey-188i13.1
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable metal ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within DNA-templated transcription. Predicted to be active in nucleus. Is expressed in telencephalon. Orthologous to human PHF3 (PHD finger protein 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Diotel et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
| Domain | IPR001965 | Zinc finger, PHD-type |
| Domain | IPR003618 | Transcription elongation factor S-II, central domain |
| Domain | IPR012921 | Spen paralogue and orthologue SPOC, C-terminal |
| Domain | IPR019787 | Zinc finger, PHD-finger |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR036575 | Transcription elongation factor S-II, central domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Spen paralogue and orthologue SPOC, C-terminal | Transcription elongation factor S-II, central domain | Transcription elongation factor S-II, central domain superfamily | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-finger | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:B8A483 | InterPro | 1691 | ||||||||
| UniProtKB:A0A8M6Z9N0 | InterPro | 1690 | ||||||||
| UniProtKB:A0AB32T732 | InterPro | 1713 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers