ZFIN ID: ZDB-GENE-080505-2
Gene Name: cell adhesion molecule 1a
Gene Symbol: cadm1a    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Involved in glial cell development and retina development in camera-type eye. Predicted to localize to integral component of membrane. Is expressed in immature eye; nervous system; and retina.
Genome Resources: Alliance (1),  Gene:569931 (1),  Ensembl(GRCz11):ENSDARG00000031075 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
cu23 Small Deletion Unknown Unknown CRISPR
ihb53 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb54 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb55 Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • la021901Tg Transgenic Insertion Unknown Unknown DNA
    sa23937 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37308 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cadm1a 1
    CRISPR2-cadm1a
    1
    CRISPR3-cadm1a 1
    DISEASE ASSOCIATED WITH cadm1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cadm1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process glial cell development (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cadm1a-201 (1)    Ensembl 1225
    cadm1a-203 (1)    Ensembl 1309
    cadm1a-204 (1)    Ensembl 1342
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cadm1a No data available
    MARKER RELATIONSHIPS
    cadm1a Contained in: [BAC] CH211-180M12, DKEY-122C9 (1) (order this), DKEY-269G4 (1) (order this), DKEYP-10D4 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001113551 (1) 1344 nt
    Genomic GenBank:CR759955 (1) 232446 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B0F6R0 (1) 447 aa
    Sequence Information (all 32)
    ORTHOLOGY for cadm1a ( Chr: 21 )
    CITATIONS (26)