ZFIN ID: ZDB-GENE-080505-2
Gene Name: cell adhesion molecule 1a
Gene Symbol: cadm1a
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from Pietri et al., 2008
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  caudal octavolateralis nucleus, caudal parvocellular preoptic nucleus, caudal tuberculum, central caudal thalamic nucleus (all 51) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb53 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb54 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb55 Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • la021901Tg Transgenic Insertion Unknown Unknown DNA
    sa23937 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37308 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: CRISPR1-cadm1a (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cadm1a HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell recognition (more)
    Cellular Component integral component of membrane (more)
    Molecular Function cell adhesion molecule binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003585
  • InterPro:IPR003598
  • InterPro:IPR003599
  • InterPro:IPR007110
  • InterPro:IPR013106 (1)
  • InterPro:IPR013162
  • InterPro:IPR013783
  • PROSITE:PS50835
  • Pfam:PF07686 (1)
  • Pfam:PF08205
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cadm1a-001 (1) 1342
    cadm1a-002 (1) 1225
    cadm1a-003 (1) 1309
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cadm1a No data available
    MARKER RELATIONSHIPS
    cadm1aContained in: [BAC] CH211-180M12 (order this), DKEY-122C9 (1) (order this), DKEY-269G4 (1) (order this), DKEYP-10D4 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001113551 (1) 1344bp
    Genomic GenBank:CR759955 (1) 232446bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0F6R0 447aa
    Sequence Clusters UniGene:143351 (1)
    Sequence Information (all 35)
    OTHER cadm1a GENE PAGES
  • Alliance (1)
  • Gene:569931 (1)
  • VEGA:OTTDARG00000031199 (1)
  • Ensembl(GRCz10):ENSDARG00000031075 (1)
  • ORTHOLOGY for cadm1a (Chr: 21)
    CITATIONS (21)