ZFIN ID: ZDB-GENE-080130-3
Gene Name: solute carrier family 12 (sodium/potassium/chloride transporter), member 1
Gene Symbol: slc12a1
Previous Names: nkcc2 (1), si:ch73-34a12.1
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 25 figures from 12 publications
Wild-type Stages, Structures: Segmentation:26+ somites (22.0h-24.0h) to Adult (90d-730d, breeding adult)
  developing mesonephric nephron, distal early tubule, mesonephric duct apical plasma membrane, pronephric distal early tubule (all 5) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH slc12a1 HUMAN ORTHOLOG 
Disease Ontology Term OMIM Term OMIM Phenotype ID
Bartter disease Bartter syndrome, type 1 601678
GENE ONTOLOGY 
Ontology GO Term
Cellular Component apical plasma membrane (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA ottdart00000062234 (1) 1983
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION No description available
ANTIBODIES 
Ab1-slc12a (1)
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM slc12a1 No data available
SEGMENT (CLONE AND PROBE) RELATIONSHIPS 
slc12a1Contained in: [BAC] CH73-34A12 (1) (order this)
SEQUENCE INFORMATION 
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_009293403 (1) 2501bp
Genomic GenBank:CU498833 (1) 66872bp
Select Tool
Polypeptide RefSeq:XP_009291678 (1) 820aa
Sequence Clusters UniGene:156611 (1)
Sequence Information (all 8)
OTHER slc12a1 GENE PAGES 
  • Gene:100329975 (1)
  • VEGA:OTTDARG00000043018 (1)
  • ORTHOLOGY for slc12a1 (Chr: 18) 
    Species Symbol Chromosome Accession # Evidence
    Human SLC12A1 15
  • Gene:6557
  • OMIM:600839
  • HGNC:10910
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Slc12a1 2
  • MGI:103150
  • Gene:20495
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (20)