ZFIN ID: ZDB-GENE-071009-4
Gene Name: integrin, alpha 11b
Gene Symbol: itga11b    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to be involved in cell adhesion and integrin-mediated signaling pathway. Predicted to localize to the integrin complex. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human ITGA11 (integrin subunit alpha 11).
Genome Resources: Alliance (1),  Gene:567175 (1),  Ensembl(GRCz11):ENSDARG00000007950 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014653Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa5994 Point Mutation Unknown Splice Site ENU
    sa8853 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44212 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH itga11b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH itga11b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Conserved_site IPR018184 Integrin alpha chain, C-terminal cytoplasmic region, conserved site
    Domain IPR002035 von Willebrand factor, type A
    Domain IPR013649 Integrin alpha-2
    Family IPR000413 Integrin alpha chain
    Homologous_superfamily IPR028994 Integrin alpha, N-terminal
    Homologous_superfamily IPR032695 Integrin domain superfamily
    Homologous_superfamily IPR036465 von Willebrand factor A-like domain superfamily
    Repeat IPR013517 FG-GAP repeat
    Repeat IPR013519 Integrin alpha beta-propellor
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA itga11b-201 (1)    Ensembl 4362
    itga11b-202 (1)    Ensembl 360
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM itga11b No data available
    MARKER RELATIONSHIPS
    itga11b Contained in: [BAC] CH211-139F22 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_690467 (1) 4081 nt
    Genomic GenBank:CU183952 (1) 173283 nt
    Select Tool
    Polypeptide UniProtKB:X1WBF9 (1) 1218 aa
    Sequence Information (all 8)
    ORTHOLOGY for itga11b ( Chr: 25 )
    CITATIONS (18)