ZFIN is now using GRCz12tu for Genomic Data
Gene
sin3aa
- ID
- ZDB-GENE-070620-3
- Name
- SIN3 transcription regulator family member Aa
- Symbol
- sin3aa Nomenclature History
- Previous Names
-
- sin3a
- zgc:162128
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transcription corepressor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in chromosome and nucleolus. Predicted to be part of Sin3-type complex. Predicted to be active in chromatin. Human ortholog(s) of this gene implicated in chromosome 15q24 deletion syndrome. Orthologous to human SIN3A (SIN3 transcription regulator family member A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Witteveen-Kolk syndrome | Alliance | Witteveen-Kolk syndrome | 613406 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Histone deacetylase interacting domain | Paired amphipathic helix | Paired amphipathic helix superfamily | Sin3, C-terminal | Transcriptional regulatory protein Sin3-like |
|---|---|---|---|---|---|---|---|
| UniProtKB:A5D6S0 | InterPro | 1276 | |||||
| UniProtKB:A0AC58IVI2 | InterPro | 1276 | |||||
| UniProtKB:A0AC58IVI6 | InterPro | 1292 | |||||
| UniProtKB:A0AC58IVI8 | InterPro | 1276 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sin3aa-201
(1)
|
Ensembl | 5,189 nt | ||
| mRNA |
sin3aa-202
(1)
|
Ensembl | 357 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers