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ZIRC
ZFIN ID: ZDB-GENE-070410-141
Gene Name: zgc:163098
Gene Symbol: zgc:163098
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Predicted to be involved in RNA processing. Orthologous to human U2SURP (U2 snRNP associated SURP domain containing).

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6993 Point Mutation Unknown Splice Site ENU
sa6994 Point Mutation Unknown Splice Site ENU
sa33656 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33657 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38490 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40504 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40505 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:163098 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:163098 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process RNA processing (more)
    Cellular Component cellular_component (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:163098-201 (1) 3117
    zgc:163098-203 (1) 812
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:163098 No data available
    MARKER RELATIONSHIPS
    zgc:163098 Contained in: [BAC] DKEY-17O15 (1) (order this)
    zgc:163098 Encodes: [cDNA] MGC:163098 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089532 (1) 1642 bp
    Genomic GenBank:BX927261 (1) 227322 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8Q5V2 (1) 874 aa
    Sequence Clusters UniGene:2575 (1)
    Sequence Information (all 19)
    ORTHOLOGY for zgc:163098 ( Chr: 5 )
    CITATIONS (14)