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ZIRC
ZFIN ID: ZDB-GENE-070209-182
Gene Name: AT rich interactive domain 3B (BRIGHT-like)
Gene Symbol: arid3b
Sequence Ontology ID : SO:0001217

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Previous Names: wu:fc16g09, wu:fc87c02, zgc:158235

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to localize to the  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011748Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023280Tg Transgenic Insertion Unknown Unknown DNA
    la028700Tg Transgenic Insertion Unknown Unknown DNA
    la028701Tg Transgenic Insertion Unknown Unknown DNA
    sa24702 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arid3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH arid3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arid3b-201 (1) 3726
    arid3b-202 (1) 532
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM arid3b No data available
    MARKER RELATIONSHIPS
    arid3b Contained in: [BAC] CH211-67P11 (1) (order this)
    [Fosmid] CH1073-368C1 (1) (order this)
    arid3b Encodes: [EST] fc16g09, fc87c02
    [cDNA] MGC:158235 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001083002 (1) 3761 bp
    Genomic GenBank:CR376821 (1) 187216 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IZF6 (1) 616 aa
    Sequence Clusters UniGene:150509 (1)
    Sequence Information (all 20)
    ORTHOLOGY for arid3b ( Chr: 25 )
    CITATIONS (23)