ZFIN ID: ZDB-GENE-061218-2
Gene Name: ataxin 1b
Gene Symbol: atxn1b

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Previous Names: atxn1 (1), atxn1a (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Carlson et al., 2009
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  cerebellum
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019660Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents: CRISPR1-atxn1b (2), CRISPR2-atxn1b (2), CRISPR3-atxn1b (2), CRISPR4-atxn1b (2), CRISPR5-atxn1b (2) (all 7) expand
PHENOTYPE No data available
DISEASE ASSOCIATED WITH atxn1b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
spinocerebellar ataxia type 1 Spinocerebellar ataxia 1 164400
Ontology GO Term
Cellular Component nucleus (more)
Molecular Function RNA binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003652 (1)
  • PROSITE:PS51148 (1)
  • Pfam:PF08517 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atxn1b-001 (1) 8697
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIES
    Ab1-atxn1 (1), Ab2-atxn1 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atxn1b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atxn1bContained in: [BAC] CH211-222P22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_689102 (1) 4943bp
    Genomic GenBank:CR388381 (1) 141855bp
    Select Tool
    Polypeptide UniProtKB:E7F6Z5 (1) 827aa
    Sequence Clusters UniGene:118564 (1)
    Sequence Information (all 10)
    OTHER atxn1b GENE PAGES
  • Gene:565841 (1)
  • VEGA:OTTDARG00000034372 (1)
  • Ensembl(GRCz10):ENSDARG00000060862 (1)
  • ORTHOLOGY for atxn1b (Chr: 16)
    CITATIONS (19)