header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-061026-3
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: nyctalopin
Gene Symbol: nyx
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name:

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in optokinetic behavior and visual perception. Used to study congenital stationary night blindness and congenital stationary night blindness 1A. Human ortholog(s) of this gene implicated in  ...
GENE EXPRESSION
All Expression Data: 5 figures from Bahadori et al., 2006
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31731 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: Fig. 4 from Peachey et al., 2012
    Observed in:
    DISEASE ASSOCIATED WITH nyx HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    congenital stationary night blindness 1A Night blindness, congenital stationary (complete), 1A, X-linked 310500
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process optokinetic behavior (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000483 (1)
  • InterPro:IPR001611 (1)
  • InterPro:IPR003591 (1)
  • InterPro:IPR032675 (1)
  • PROSITE:PS51450 (1)
  • Pfam:PF13855 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nyx-201 (1) 2226
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nyx
    MARKER RELATIONSHIPS
    nyx Contained in: [BAC] DKEY-216E24 (1) (order this)
    nyx Encodes: [cDNA] MGC:194863 (1) (order this), MGC:194882 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077617 (1) 1410 bp
    Select Tool
    Genomic GenBank:BX545856 (1) 209295 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q00P20 (1) 469 aa
    Select Tool
    Sequence Clusters UniGene:82636 (1)
    Sequence Information (all 17)
    OTHER nyx GENE PAGES
  • Alliance (1)
  • Gene:568821 (1)
  • VEGA:OTTDARG00000025812 (1)
  • Ensembl(GRCz11):ENSDARG00000061791 (2)
    • ORTHOLOGY for nyx ( Chr: 9 )
    CITATIONS (19)