ZFIN ID: ZDB-GENE-060825-154
Gene Name: sorting nexin 22
Gene Symbol: snx22    Nomenclature History

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Previous Names: im:6905586, zgc:153718

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity. Orthologous to human SNX22 (sorting nexin 22).
Genome Resources: Alliance (1),  Gene:561624 (1),  Ensembl(GRCz11):ENSDARG00000053204 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6905586]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37996 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH snx22 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snx22 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function phosphatidylinositol binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snx22-201 (1)    Ensembl 1053
    snx22-202 (1)    Ensembl 839
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snx22 No data available
    MARKER RELATIONSHIPS
    snx22 Contained in: [BAC] CH211-11I22 (1)
    snx22 Encodes: [EST] IMAGE:6905586 (1)
    [cDNA] MGC:153718 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001045374 (1) 1058 nt
    Genomic GenBank:AL929134 (1) 162177 nt
    Select Tool
    Polypeptide UniProtKB:F1Q9H4 (1) 220 aa
    Sequence Information (all 11)
    ORTHOLOGY for snx22 ( Chr: 25 )
    CITATIONS (16)