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ZIRC
ZFIN ID: ZDB-GENE-060518-2
Gene Name: popeye domain containing 2
Gene Symbol: popdc2    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have cAMP binding activity. Involved in cardiac conduction; heart looping; and striated muscle cell differentiation. Predicted to localize to the sarcolemma. Is expressed in heart rudiment; musculature system; pectoral fin bud; pericardial region; and somite. Orthologous to human POPDC2 (popeye domain containing 2).
Genome Resources: Alliance (1),  Gene:793666 (1), 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-popdc2 N/A 2
MO2-popdc2 N/A 2
DISEASE ASSOCIATED WITH popdc2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH popdc2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cardiac conduction (more)
Cellular Component integral component of membrane (more)
Molecular Function cAMP binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006916 (1)
  • InterPro:IPR018490 (1)
  • Pfam:PF04831 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA popdc2-201 (1)    Ensembl 2645
    popdc2-202 (1)    Ensembl 2476
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-popdc2 polyclonal Rabbit IHC Sigma-Aldrich
    1
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM popdc2 No data available
    MARKER RELATIONSHIPS
    popdc2 Contained in: [BAC] RP71-68N21 (1) (order this)
    popdc2 Encodes: [EST] fi26h09
    [cDNA] MGC:158519 (1), MGC:174632 (1) (order this), MGC:191375 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020800 (1) 2661 bp
    Genomic GenBank:CT027983 (1) 185833 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RP27 (1) 370 aa
    Sequence Clusters UniGene:76557 (1)
    Sequence Information (all 29)
    ORTHOLOGY for popdc2 ( Chr: 9 )
    CITATIONS (19)