Gene

rnpc3

ID
ZDB-GENE-060312-35
Name
RNA-binding region (RNP1, RRM) containing 3
Symbol
rnpc3 Nomenclature History
Previous Names
  • caliban (1)
  • clbn
  • zgc:136847 (1)
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to have U12 snRNA binding activity and pre-mRNA intronic binding activity. Involved in animal organ development; digestive tract development; and mRNA splicing, via spliceosome. Predicted to localize to U12-type spliceosomal complex. Is expressed in digestive system; pharyngeal arch; post-vent region; proliferative region; and sensory system. Human ortholog(s) of this gene implicated in isolated growth hormone deficiency. Orthologous to human RNPC3 (RNA binding region (RNP1, RRM) containing 3).
Genome Resources
Note
None
Expression
All Expression Data
4 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from Markmiller et al., 2014
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rnpc3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Growth hormone deficiency, isolated, type V 618160
Associated With rnpc3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain
UniProtKB:F1Q8J0 505
UniProtKB:X1WCA8 186
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Ensembl Gene Tree
Citations