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ZIRC
ZFIN ID: ZDB-GENE-051014-1
Gene Name: sphingomyelin phosphodiesterase 2a
Gene Symbol: smpd2a
Sequence Ontology ID : SO:0001217

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Previous Names: smpd2, neutral SMase I (1), neutral sphingomyelinase (1), nSMase1 (1)

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits sphingomyelin phosphodiesterase activity. Involved in several processes, including cellular response to temperature stimulus; sphingolipid mediated signaling pathway; and sphingolipid  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [IMAGE:7156202]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH smpd2a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH smpd2a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to temperature stimulus (more)
Cellular Component Golgi apparatus (more)
Molecular Function sphingomyelin phosphodiesterase activity (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005135 (1)
  • InterPro:IPR036691 (1)
  • InterPro:IPR038772 (1)
  • Pfam:PF03372 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smpd2a-201 (1) 1702
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM smpd2a No data available
    MARKER RELATIONSHIPS
    smpd2a Contained in: [Fosmid] CH1073-182O11 (1) (order this)
    smpd2a Encodes: [EST] IMAGE:7156202 (1) (order this)
    [cDNA] MGC:194512 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030219 (1) 1263 bp
    Genomic GenBank:CU570774 (1) 33235 bp
    Select Tool
    Polypeptide UniProtKB:F1QUD7 (1) 421 aa
    Sequence Clusters UniGene:47411 (1)
    Sequence Information (all 18)
    ORTHOLOGY for smpd2a ( Chr: 23 )
    CITATIONS (18)