ZFIN ID: ZDB-GENE-050809-135
Gene Name: vesicle transport through interaction with t-SNAREs 1A
Gene Symbol: vti1a    Nomenclature History

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Previous Name: zgc:109895

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have SNAP receptor activity and SNARE binding activity. Predicted to be involved in Golgi vesicle transport; protein targeting to vacuole; and retrograde transport, endosome to Golgi. Predicted to localize to several cellular components, including Golgi apparatus; SNARE complex; and cytoplasmic vesicle. Orthologous to human VTI1A (vesicle transport through interaction with t-SNAREs 1A).
Genome Resources: Alliance (1),  Gene:567385 (1),  Ensembl(GRCz11):ENSDARG00000045065 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la012190Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH vti1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH vti1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process intracellular protein transport (more)
Cellular Component Golgi apparatus (more)
Molecular Function SNAP receptor activity (more)
GO Terms (all 17)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA vti1a-201 (1)    Ensembl 757
vti1a-202 (1)    Ensembl 739
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM vti1a No data available
MARKER RELATIONSHIPS
vti1a Contained in: [BAC] CH73-78C21 (1), CH73-167A11 (1), DKEY-46I8 (1) (order this)
[Fosmid] CH1073-103H6 (1)
vti1a Encodes: [cDNA] MGC:109895 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001034980 (1) 1360 nt
Genomic RefSeq:NW_018394852 (1) Blast at MegaBLAST
Polypeptide UniProtKB:A0A2R8Q5I2 (1) 224 aa
Sequence Information (all 29)
ORTHOLOGY for vti1a ( Chr: 12 )
CITATIONS (21)