ZFIN ID: ZDB-GENE-050327-91
Gene Name: actin binding LIM protein 1b
Gene Symbol: ablim1b    Nomenclature History

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Previous Names: si:dkeyp-84e12.1, zgc:112954

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have actin filament binding activity. Predicted to be involved in cilium assembly and lamellipodium assembly. Predicted to localize to stress fiber. Orthologous to human ABLIM1 (actin binding LIM protein 1).
Genome Resources: Alliance (1),  Gene:541550 (1),  Ensembl(GRCz11):ENSDARG00000045064 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18272 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-ablim1b
    2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ablim1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ablim1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cytoskeleton organization (more)
    Cellular Component integral component of membrane (more)
    Molecular Function actin binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ablim1b-201 (1)    Ensembl 1652
    ablim1b-202 (1)    Ensembl 331
    ablim1b-205 (1)    Ensembl 759
    ablim1b-207 (1)    Ensembl 6920
    ablim1b-208 (1)    Ensembl 261
    ncRNA ablim1b-006 (1)    Ensembl 771
    ablim1b-007 (1)    Ensembl 846
    ablim1b-009 (1) 766
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ablim1b No data available
    MARKER RELATIONSHIPS
    ablim1b Contained in: [BAC] CH73-320J22 (1), DKEY-10K21 (1) (order this), DKEYP-84E12 (1)
    ablim1b Encodes: [cDNA] MGC:112954 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001014363 (1) 1698 nt
    Genomic GenBank:CU464184 (1) 212643 nt Blast at MegaBLAST
    Polypeptide UniProtKB:U3JB13 (1) 758 aa
    Sequence Information (all 123)
    ORTHOLOGY for ablim1b ( Chr: 12 )
    CITATIONS (21)