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ZIRC
ZFIN ID: ZDB-GENE-050327-13
Gene Name: ER lipid raft associated 1
Gene Symbol: erlin1
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: fa10h05, fb19h05, wu:fa10h05, wu:fb19h05, zgc:110547

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cholesterol binding activity. Predicted to be involved in SREBP signaling pathway. Predicted to localize to the endoplasmic reticulum membrane. Human ortholog(s) of this gene  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110547]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7155366]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la012323Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH erlin1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    hereditary spastic paraplegia 62 Spastic paraplegia 62 615681
    DISEASE ASSOCIATED WITH erlin1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cholesterol metabolic process (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function lipid binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001107 (1)
  • InterPro:IPR033294 (1)
  • InterPro:IPR036013 (1)
  • Pfam:PF01145 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA erlin1-201 (1) 3706
    erlin1-202 (1) 967
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM erlin1 No data available
    MARKER RELATIONSHIPS
    erlin1 Contained in: [BAC] CH211-223P8 (1) (order this)
    erlin1 Encodes: [EST] fa10h05 (1), fb19h05, IMAGE:7155366 (1) (order this)
    [cDNA] MGC:110547 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001014303 (1) 2000 bp
    Genomic GenBank:AL929005 (1) 166364 bp
    Select Tool
    Polypeptide UniProtKB:Q58EG2 (1) 342 aa
    Sequence Clusters UniGene:117558 (1)
    Sequence Information (all 18)
    ORTHOLOGY for erlin1 ( Chr: 13 )
    CITATIONS (26)