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ZIRC
ZFIN ID: ZDB-GENE-050320-12
Gene Name: protein tyrosine phosphatase non-receptor type 18
Gene Symbol: ptpn18    Nomenclature History

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Previous Name: zgc:113105

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Orthologous to human PTPN18 (protein tyrosine phosphatase non-receptor type 18).
Genome Resources: Alliance (1),  Gene:541324 (1),  Ensembl(GRCz11):ENSDARG00000006308 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6900525]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa41126 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ptpn18 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptpn18 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dephosphorylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ptpn18-201 (1)    Ensembl 2386
    ncRNA ptpn18-002 (1)    Ensembl 464
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ptpn18 No data available
    MARKER RELATIONSHIPS
    ptpn18 Contained in: [BAC] DKEY-161M5 (1) (order this)
    ptpn18 Encodes: [EST] IMAGE:6900525 (1) (order this)
    [cDNA] MGC:113105 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013452 (1) 2400 bp
    Genomic GenBank:CR450770 (1) 153753 bp
    Select Tool
    Polypeptide UniProtKB:B0UYE7 (1) 514 aa
    Sequence Clusters UniGene:88321 (1)
    Sequence Information (all 17)
    ORTHOLOGY for ptpn18 ( Chr: 8 )
    CITATIONS (18)