ZFIN ID: ZDB-GENE-050314-1
Gene Name: DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.1
Gene Symbol: dnmt3bb.1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: cb633 (1), dnmt3b1 (1), dnmt3b (1), dnmt4

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-methyltransferase activity; involved in several processes, including DNA methylation on cytosine within a CG sequence, determination of left/right symmetry, and hematopoietic  ...
GENE EXPRESSION
All Expression Data: 26 figures from 10 publications
Directly Submitted Expression Data: 6 figures (34 images) from Thisse et al., 2001 [cb633]
  6 figures (19 images) from Thisse et al., 2004 [IMAGE:7155993]
Wild-type Stages, Structures: Blastula:High (3.33h-3.66h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b1237 Small Deletion Unknown Premature Stop TALEN
ioz103 Insertion Exon 3 Unknown CRISPR
la022494Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la022495Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12816 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15458 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • y258 Small Deletion Exon 6 Premature Stop TALEN
    Targeting reagents:
    PHENOTYPE
    Data: 8 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH dnmt3bb.1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    immunodeficiency-centromeric instability-facial anomalies syndrome 1 Immunodeficiency-centromeric instability-facial anomalies syndrome 1 242860
    DISEASE ASSOCIATED WITH dnmt3bb.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process determination of left/right symmetry (more)
    Molecular Function DNA-methyltransferase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000313 (1)
  • InterPro:IPR001525 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR018117 (1)
  • InterPro:IPR025766 (1)
  • InterPro:IPR029063 (1)
  • InterPro:IPR030488 (1)
  • InterPro:IPR040552 (1)
  • PROSITE:PS00094 (1)
  • PROSITE:PS50812 (1)
  • PROSITE:PS51533 (1)
  • PROSITE:PS51679 (1)
  • Pfam:PF00145 (1)
  • Pfam:PF00855 (1)
  • Pfam:PF17980 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA dnmt3bb.1-201 (1) 3678
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM dnmt3bb.1 No data available
    MARKER RELATIONSHIPS
    dnmt3bb.1Contained in: [BAC] DKEY-108P14 (1) (order this), DKEY-210I3 (1) (order this)
    dnmt3bb.1Encodes: [EST] cb633 (order this), IMAGE:7155993 (1) (order this)
    [cDNA] MGC:152725 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025450 (1) 3544bp
    Genomic GenBank:BX927275 (1) 133912bp
    Select Tool
    Polypeptide UniProtKB:Q08CT6 (1) 816aa
    Sequence Clusters UniGene:34505 (1)
    Sequence Information (all 22)
    OTHER dnmt3bb.1 GENE PAGES
  • Alliance (1)
  • Gene:317744 (1)
  • VEGA:OTTDARG00000021259 (1)
  • ORTHOLOGY for dnmt3bb.1 (Chr: 23)
    CITATIONS (51)