ZFIN ID: ZDB-GENE-050306-47
Gene Name: zgc:112964
Gene Symbol: zgc:112964    Nomenclature History

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Previous Names: fb93d07, si:ch73-329n5.4, wu:fb93d07

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to be involved in cell-matrix adhesion.
Genome Resources: Alliance (1),  Gene:503764 (1),  Ensembl(GRCz11):ENSDARG00000101200 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6907160]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa30997 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42643 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:112964 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:112964 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell-matrix adhesion (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR003886 NIDO domain
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:112964-002 (1) 447
    zgc:112964-201 (1)    Ensembl 1882
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:112964 No data available
    MARKER RELATIONSHIPS
    zgc:112964 Contained in: [BAC] CH73-329N5 (1)
    zgc:112964 Encodes: [EST] fb93d07, IMAGE:6907160 (1)
    [cDNA] MGC:112964 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001013342 (1) 1930 nt
    Genomic GenBank:CU914622 (1) 112193 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IB81 (1) 300 aa
    Sequence Information (all 15)
    ORTHOLOGY for zgc:112964 ( Chr: 12 )
    CITATIONS (16)