ZFIN Gene: fgf13a

ZFIN ID: ZDB-GENE-041114-101

ZFIN ID: ZDB-GENE-041114-101

Gene Name:

fibroblast growth factor 13a

Gene Symbol:

fgf13a

Sequence Ontology ID :

SO:0000704

Previous Names:

fgf13, zgc:101784

Location:

Chr: 14 Mapping Details/Browsers

Nomenclature History

AUTOMATED DESCRIPTION

Predicted to have growth factor activity. Predicted to localize to the extracellular region. Orthologous to human FGF13 (fibroblast growth factor 13).

GENE EXPRESSION
All Expression Data:	8 figures from 2 publications
Directly Submitted Expression Data:	6 figures (13 images) from Thisse et al., 2004 [MGC:101784]
Wild-type Stages, Structures:	Segmentation:14-19 somites (16.0h-19.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
	basal plate midbrain region brain cranial ganglion diencephalon dorsal root ganglion heart hindbrain myotome neuron olfactory system optic tectum retina Rohon-Beard neuron sinoatrial node spinal cord motor neuron spinal cord tegmentum telencephalon trigeminal ganglion trigeminal placode ventricular zone
Curated Microarray Expression:	GEO (1)

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
la012564Tg	Transgenic Insertion	Unknown	Unknown	DNA	Zebrafish International Resource Center (ZIRC) (order this)
la018969Tg	Transgenic Insertion	Unknown	Unknown	DNA
mn0168Gt	Transgenic Insertion	Unknown	Unknown	DNA	Zebrafish International Resource Center (ZIRC) (order this)

Targeting reagents:

CRISPR1-fgf13a (1)

PHENOTYPE No data available

DISEASE ASSOCIATED WITH fgf13a HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH fgf13a VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Cellular Component	extracellular region (more)
Molecular Function	growth factor activity (more)

GO Terms (all 2)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR002209 (1) InterPro:IPR008996 (1) InterPro:IPR028279 (1)	PROSITE:PS00247 (1)	Pfam:PF00167 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	fgf13a-202 (1)	1130	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	fgf13a-203 (1)	2383	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	fgf13a-204 (1)	646	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	fgf13a-205 (1)	659	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	fgf13a-206 (1)	777	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

GENE PRODUCT DESCRIPTION

INTERACTIONS AND PATHWAYS

ANTIBODIESNo data available

PLASMIDSNo data available

CONSTRUCTS WITH SEQUENCES FROM fgf13a No data available

MARKER RELATIONSHIPS

fgf13aContained in:	[BAC] CH211-51P7 (1) (order this), CH211-79C4 (1) (order this), CH211-253P10 (order this), DKEY-124I15 (1) (order this)
fgf13aEncodes:	[cDNA] MGC:101784 (1) (order this), MGC:192347 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001007399 (1)	1999bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX004988 (1)	166194bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:E7F5G0 (1)	255aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
Sequence Clusters	UniGene:7596 (1)

Sequence Information (all 37)

OTHER fgf13a GENE PAGES

Alliance (1)

Gene:492758 (1)

VEGA:OTTDARG00000021166 (1)

Ensembl(GRCz11):ENSDARG00000035056 (2)

ORTHOLOGY for fgf13a (Chr: 14)

CITATIONS (35)

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