ZFIN ID: ZDB-GENE-040914-40
Gene Name: EF-hand calcium binding domain 1
Gene Symbol: efcab1    Nomenclature History

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Previous Names: im:6911536 (1), si:ch211-173p18.9 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Orthologous to human EFCAB1 (EF-hand calcium binding domain 1).
Genome Resources: Alliance (1),  Gene:558421 (1),  Ensembl(GRCz11):ENSDARG00000061377 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6911536]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-efcab1
1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH efcab1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH efcab1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component cellular_component (more)
Molecular Function calcium ion binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript efcab1-202 (1)    Ensembl 602
mRNA efcab1-201 (1)    Ensembl 771
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM efcab1 No data available
MARKER RELATIONSHIPS
efcab1 Contained in: [BAC] CH211-173P18 (1)
efcab1 Encodes: [EST] IMAGE:6911536 (1)
[cDNA] MGC:198200 (1), MGC:198202 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001044860 (1) 757 nt
Genomic GenBank:BX510986 (1) 157245 nt
Select Tool
Polypeptide UniProtKB:Q1LWZ0 (1) 216 aa
Sequence Information (all 16)
ORTHOLOGY for efcab1 ( Chr: 19 )
CITATIONS (20)