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General Information
ZIRC
ZFIN ID: ZDB-GENE-040704-24
Gene Name: small muscle protein X-linked
Gene Symbol: smpx
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:91881

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human SMPX (small muscle protein X-linked).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91881]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb325 Small Deletion Unknown Unknown CRISPR
ihb326 Indel Unknown Unknown CRISPR
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH smpx HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Deafness, X-linked 4 300066
DISEASE ASSOCIATED WITH smpx VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process striated muscle contraction (more)
Cellular Component costamere (more)
Molecular Function molecular_function (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029268 (1)
  • Pfam:PF15355 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smpx-201 (1) 2436
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smpx No data available
    MARKER RELATIONSHIPS
    smpxContained in: [BAC] DKEY-225N3 (1) (order this)
    smpxEncodes: [cDNA] MGC:91881 (1) (order this), MGC:191403 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002185 (1) 2285bp
    Genomic GenBank:BX537285 (1) 150691bp
    Select Tool
    Polypeptide UniProtKB:Q6GMK5 (1) 83aa
    Sequence Clusters UniGene:85233 (1)
    Sequence Information (all 20)
    ORTHOLOGY for smpx (Chr: 24)
    CITATIONS (18)