ZFIN ID: ZDB-GENE-040426-2795
Gene Name: RP2, ARL3 GTPase activating protein
Gene Symbol: rp2
Sequence Ontology ID : SO:0000704

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Previous Names: nme10 (1), wu:fj10e02, wu:fm72d05, zgc:55632

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 18 figures from 9 publications
Directly Submitted Expression Data: 4 figures (9 images) from Rauch et al., 2003 [MGC:55632]
  1 figure (1 image) from Thisse et al., 2004 [MGC:55632]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  anatomical structure, brain, eye, fertilized egg (all 47) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hzu1 Small Deletion Exon 2 Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • hzu2 Small Deletion Unknown Inframe Deletion TALEN
    sa17284 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-rp2 (1), MO2-rp2 (1), MO3-rp2 (1), MO4-rp2 (1), MO5-rp2 (1) (all 6) expand
    PHENOTYPE
    Data: 15 figures from 6 publications
    Observed in: apoptotic process, brain, caudal fin, determination of heart left/right asymmetry (all 30) expand
    DISEASE ASSOCIATED WITH rp2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    retinitis pigmentosa 2 Retinitis pigmentosa 2 312600
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process pronephros development (more)
    Cellular Component cell projection (more)
    Molecular Function GTP binding (more)
    GO Terms (all 24)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001564 (1)
  • InterPro:IPR006599
  • InterPro:IPR012945
  • InterPro:IPR013912
  • InterPro:IPR016098 (1)
  • InterPro:IPR017332 (1)
  • InterPro:IPR017901
  • InterPro:IPR034907
  • PROSITE:PS51329
  • Pfam:PF00334
  • Pfam:PF07986
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rp2-001 (1) 2148
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Ab1-rp2 (1), Ab2-rp2 (1), Ab3-rp2 (1), Ab4-rp2 (1), Ab5-rp2 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rp2 No data available
    MARKER RELATIONSHIPS
    rp2Contained in: [BAC] DKEY-62E6 (1) (order this)
    rp2Encodes: [EST] fj10e02, fm72d05 (1)
    [cDNA] MGC:55632 (1) (order this), MGC:192020 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213446 (1) 2020bp
    Genomic GenBank:BX322552 (1) 230846bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QC45 376aa
    Sequence Clusters UniGene:161717 (1)
    Sequence Information (all 25)
    OTHER rp2 GENE PAGES
  • Gene:406755 (1)
  • VEGA:OTTDARG00000019882 (1)
  • Ensembl(GRCz10):ENSDARG00000044339 (1)
  • ORTHOLOGY for rp2 (Chr: 6)
    CITATIONS (29)