ZFIN ID: ZDB-GENE-040426-2772
Gene Name: histone deacetylase 8
Gene Symbol: hdac8
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fd19a02, zgc:66196 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7144626]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026136Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10754 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14948 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31597 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44675 Point Mutation Unknown Unknown ENU
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hdac8 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Cornelia de Lange syndrome 5 300882
    DISEASE ASSOCIATED WITH hdac8 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process carbohydrate metabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function calmodulin binding (more)
    GO Terms (all 14)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000286 (1)
  • InterPro:IPR003084 (1)
  • InterPro:IPR008734 (1)
  • InterPro:IPR008928 (1)
  • InterPro:IPR011613 (1)
  • InterPro:IPR012341 (1)
  • InterPro:IPR023696 (1)
  • InterPro:IPR023801 (1)
  • InterPro:IPR037138 (1)
  • Pfam:PF00723 (1)
  • Pfam:PF00850 (1)
  • EC:3.5.1.98 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hdac8-001 (1) 1935
    ncRNA hdac8-002 (1) 475
    aberrant processed transcript hdac8-003 (1) 566
    ncRNA hdac8-004 (1) 528
    mRNA hdac8-005 (1) 725
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hdac8 No data available
    MARKER RELATIONSHIPS
    hdac8Contained in: [BAC] DKEY-29B6 (1) (order this)
    hdac8Encodes: [EST] fd19a02 (1), IMAGE:7144626 (1) (order this)
    [cDNA] MGC:66196 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213431 (1) 1935bp
    Genomic GenBank:CR318655 (1) 247390bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A286YAZ5 (1) 1232aa
    Sequence Clusters UniGene:3849 (1)
    Sequence Information (all 21)
    OTHER hdac8 GENE PAGES
  • Alliance (1)
  • Gene:406740 (1)
  • VEGA:OTTDARG00000020279 (1)
  • ORTHOLOGY for hdac8 (Chr: 7)
    CITATIONS (28)