Transcript

hdac8-205

ID

ZDB-TSCRIPT-160919-172

Name

hdac8-205

Previous Names

hdac8-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

hdac8 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000064052 (1) [ Show ] (double-click sequence to select)

[Download]

>OTTDART00000064052 ZDB-TSCRIPT-160919-172 cdna: chromosome:VEGA67:7:51430373:51434913:-1 gene:OTTDARG00000020279.2 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay gene_symbol:hdac8 description:histone deacetylase 8
ATTGTTGTAAGGTTCAGTCATTGTGAGGACAGCCAGAGCT
CACTGCGGGGCTGTGTATCTGTTTATGTGGTGTTTTGATT
TTAATAGTTTGATTTAAATGAGTGAAAAAAGCGACAGTAA
TGATGATAAAAGCAGAACTCGCAGCGTGGTGTATGTTTAC
AGTCCGGAATACATACAGACATGTGACTCACTGTCTAAAG
TGCCAAACCGGGCGAGCATGGTGCATTCACTGATCGAGGC
GTATGGCTTATTGAAATACATGAGGTGTGTCTTGATTTGG
TCGTGAAGCCTCATGTGGCTTCAATAGAGGAGATGGCTGT
GTTTCATACAGACTCATACCTGCAGCACCTGCACAAGATC
AGCCAGGACGGGGACAATGATGACCCTCAGTCTGCTGACT
TTGGACTGGGTTATGACTGTCCGGTGGTGGAGGGTATTTT
TGATTACGCGGCTGCCGTTGGAGGAGCCACTCTGACTGCT
GCCCAGAATCTGCTGGATGGAAAGTGTGATGTGGCTATCA
ACTGGGCCGGAGGGTGGCATCACGCCAAGAAGGACGAGGC
ATCTGG

Related Transcripts

Transcripts related to hdac8

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	hdac8-205	Havana	566 nt
mRNA	hdac8-201 (1) Ensembl	Havana	1935 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	hdac8-203 (1) Ensembl	Havana	725 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	hdac8-002 (1) Ensembl	Havana	475 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	hdac8-004 (1) Ensembl	Havana	528 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations