ZFIN ID: ZDB-GENE-040426-2709
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Gene Name: vaccinia related kinase 1
Gene Symbol: vrk1
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fe16f06, zgc:56266

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(Including Attributions)
Location: Ambiguous Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56266]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23040 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH vrk1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    pontocerebellar hypoplasia type 1A Pontocerebellar hypoplasia type 1A 607596
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Golgi disassembly (more)
    Cellular Component Golgi stack (more)
    Molecular Function ATP binding (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000719 (1)
  • InterPro:IPR008271 (1)
  • InterPro:IPR011009 (1)
  • InterPro:IPR017441 (1)
    		•
  • PROSITE:PS00107 (1)
  • PROSITE:PS00108 (1)
  • PROSITE:PS50011 (1)
    		•
  • Pfam:PF00069 (1)
    		•
  • EC:2.7.11.1 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    pseudogenic transcript ottdart00000046472 (1) 1275
    Select Tool
    mRNA vrk1-001 (1) 1542
    Select Tool
    ncRNA vrk1-002 (1) 448
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM vrk1 No data available
    MARKER RELATIONSHIPS
    vrk1Contained in: [BAC] CH73-218C12 (1) (order this), CH211-135E15 (1) (order this)
    [Fosmid] CH1073-432E22 (1) (order this)
    vrk1Encodes: [EST] fe16f06 (1)
    [cDNA] MGC:56266 (1) (order this), MGC:174836 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213385 (1) 1562bp
    Select Tool
    Genomic GenBank:CU467823 (1) 135288bp
    Select Tool
    Polypeptide UniProtKB:A7MCR4 (1) 425aa
    Select Tool
    Sequence Clusters UniGene:77494 (1)
    Sequence Information (all 20)
    OTHER vrk1 GENE PAGES
  • Alliance (1)
  • Gene:406694 (1)
  • VEGA:OTTDARG00000033124 (1)
  • VEGA:OTTDARG00000035003 (1)
  • Ensembl(GRCz10):ENSDARG00000018006 (1)
    • ORTHOLOGY for vrk1 (Ambiguous)
    CITATIONS (20)