ZFIN ID: ZDB-GENE-040426-2709
Gene Name: vaccinia related kinase 1
Gene Symbol: vrk1

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Previous Names: wu:fe16f06, zgc:56266

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(Including Attributions)
Location: Ambiguous Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56266]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23040 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH vrk1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    pontocerebellar hypoplasia type 1A Pontocerebellar hypoplasia type 1A 607596
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Golgi disassembly (more)
    Cellular Component Golgi stack (more)
    Molecular Function ATP binding (more)
    GO Terms (all 17)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000719 (1)
  • InterPro:IPR008271 (1)
  • InterPro:IPR011009 (1)
  • InterPro:IPR017441 (1)
  • PROSITE:PS00107 (1)
  • PROSITE:PS00108 (1)
  • PROSITE:PS50011 (1)
  • Pfam:PF00069 (1)
  • EC:2.7.11.1 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    pseudogenic transcript ottdart00000046472 (1) 1275
    mRNA vrk1-001 (1) 1542
    ncRNA vrk1-002 (1) 448
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM vrk1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    vrk1Contained in: [BAC] CH73-218C12 (1) (order this), CH211-135E15 (1) (order this)
    [Fosmid] CH1073-432E22 (1) (order this)
    vrk1Encodes: [EST] fe16f06 (1)
    [cDNA] MGC:56266 (1) (order this), MGC:174836 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213385 (1) 1562bp
    Genomic GenBank:CU467823 (1) 135288bp
    Select Tool
    Polypeptide UniProtKB:A7MCR4 (1) 425aa
    Sequence Clusters UniGene:77494 (1)
    Sequence Information (all 18)
    OTHER vrk1 GENE PAGES
  • Gene:406694 (1)
  • VEGA:OTTDARG00000033124 (1)
  • VEGA:OTTDARG00000035003 (1)
  • Ensembl(GRCz10):ENSDARG00000018006 (1)
  • ORTHOLOGY for vrk1 (Ambiguous)
    Species Symbol Chromosome Accession # Evidence
    Human VRK1 14
  • Gene:7443
  • OMIM:602168
  • HGNC:12718
  • Amino acid sequence comparison (1)
    Download Curated Orthology
    CITATIONS (18)