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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2649
Gene Name: SEC13 homolog, nuclear pore and COPII coat complex component
Gene Symbol: sec13
Sequence Ontology ID : SO:0000704

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Previous Names: sec13l1 (1), cb271 (1), sb:cb271, wu:fa08f09, zgc:63980 (1)

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity. Involved in several processes, including animal organ development; extracellular matrix constituent secretion; and opsin transport. Localizes to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sq198 Point Mutation Unknown Unknown ENU
Targeting reagents:
PHENOTYPE
Data: 28 figures from 4 publications
Observed in:
DISEASE ASSOCIATED WITH sec13 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sec13 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cartilage development (more)
Cellular Component endoplasmic reticulum exit site (more)
Molecular Function structural molecule activity (more)
GO Terms (all 18)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA sec13-201 (1) 1473
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM sec13 No data available
MARKER RELATIONSHIPS
sec13Contained in: [BAC] CH211-195G6 (1) (order this), CH211-257F16 (1) (order this), DKEY-72G22 (1) (order this)
sec13Encodes: [EST] cb271 (1) (order this), fa08f09 (1)
[cDNA] MGC:63980 (1) (order this), MGC:174049 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_213335 (1) 1454bp
Genomic GenBank:CR392343 (1) 194465bp
Select Tool
Polypeptide UniProtKB:A0A2R8RKG2 (1) 336aa
Sequence Clusters UniGene:5496 (1)
Sequence Information (all 21)
ORTHOLOGY for sec13 (Chr: 22)
CITATIONS (27)