Gene

sec13

ID
ZDB-GENE-040426-2649
Name
SEC13 homolog, nuclear pore and COPII coat complex component
Symbol
sec13 Nomenclature History
Previous Names
  • sec13l1 (1)
  • cb271 (1)
  • sb:cb271
  • wu:fa08f09
  • zgc:63980 (1)
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to have structural molecule activity. Involved in several processes, including animal organ development; extracellular matrix constituent secretion; and opsin transport. Localizes to endoplasmic reticulum exit site. Is expressed in several structures, including alar plate midbrain region; digestive system; optic vesicle; pectoral fin musculature; and skeletal element. Orthologous to human SEC13 (SEC13 homolog, nuclear pore and COPII coat complex component).
Genome Resources
Note
None
Expression
All Expression Data
11 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
28 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sec13 Human Ortholog
No data available
Associated With sec13 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR017986 WD40-repeat-containing domain
Family IPR037363 Sec13/Seh1 family
Family IPR037596 Protein Sec13
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Domain Details Per Protein
Protein Length Protein Sec13 Sec13/Seh1 family WD40 repeat WD40-repeat-containing domain WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:Q7T2E1 320
UniProtKB:A0A2R8RKG2 336
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-sec13 Mouse
  • IHC
  • WB
2
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Ensembl Gene Tree
Citations