ZFIN ID: ZDB-GENE-040426-2039
Gene Name: ubiquitin-like with PHD and ring finger domains 1
Gene Symbol: uhrf1
Sequence Ontology ID : SO:0000704

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Previous Names: fb97f09, NP95 (1), wu:fb97f09, zgc:63539

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including hemi-methylated DNA-binding activity, methylated histone binding activity, and ubiquitin protein ligase activity; involved in several processes,  ...
GENE EXPRESSION
All Expression Data: 7 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63539]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi272Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi3020Tg Transgenic Insertion Unknown Unknown DNA
    pd1092 Point Mutation Donor Splice Site of Exon 5 Splice Site ENU
    Targeting reagents:
    PHENOTYPE
    Data: 29 figures from 10 publications
    Observed in:
    DISEASE ASSOCIATED WITH uhrf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH uhrf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process inflammatory response (more)
    Cellular Component euchromatin (more)
    Molecular Function hemi-methylated DNA-binding (more)
    GO Terms (all 30)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR001841 (1)
  • InterPro:IPR001965 (1)
  • InterPro:IPR003105 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR015947 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR018957 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR021991 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR036987 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50053 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS51015 (1)
  • Pfam:PF00097 (1)
  • Pfam:PF00240 (1)
  • Pfam:PF00628 (1)
  • Pfam:PF02182 (1)
  • Pfam:PF12148 (1)
  • EC:2.3.2.27 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA uhrf1-001 (1) 5079
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM uhrf1 No data available
    MARKER RELATIONSHIPS
    uhrf1Contained in: [BAC] CH211-124A3 (1) (order this)
    uhrf1Encodes: [EST] fb97f09
    [cDNA] MGC:63539 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213077 (1) 5099bp
    Genomic GenBank:BX927276 (1) 166844bp
    Select Tool
    Polypeptide UniProtKB:E7EZF3 (1) 776aa
    Sequence Clusters UniGene:77703 (1)
    Sequence Information (all 13)
    OTHER uhrf1 GENE PAGES
  • Alliance (1)
  • Gene:406350 (1)
  • VEGA:OTTDARG00000014587 (1)
  • Ensembl(GRCz11):ENSDARG00000103409 (1)
  • ORTHOLOGY for uhrf1 (Chr: 22)
    CITATIONS (44)