ZFIN ID: ZDB-GENE-040426-2039
Gene Name: ubiquitin-like with PHD and ring finger domains 1
Gene Symbol: uhrf1
Sequence Ontology ID : SO:0000704

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Previous Names: fb97f09, NP95 (1), wu:fb97f09, zgc:63539

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63539]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  brain, ciliary marginal zone, eye, gill (all 17) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi272Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi3020Tg Transgenic Insertion Unknown Unknown DNA
    pd1092 Point Mutation Donor Splice Site of Exon 5 Splice Site ENU
    Targeting reagents: MO1-uhrf1 (1), MO2-uhrf1 (1), MO3-uhrf1 (1)
    PHENOTYPE
    Data: 20 figures from 8 publications
    Observed in: DNA methylation, DNA methylation on cytosine, DNA methylation on cytosine within a CG sequence, eye (all 34) expand
    DISEASE ASSOCIATED WITH uhrf1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process inflammatory response (more)
    Cellular Component euchromatin (more)
    Molecular Function hemi-methylated DNA-binding (more)
    GO Terms (all 33)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR001841 (1)
  • InterPro:IPR001965 (1)
  • InterPro:IPR003105 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR014722 (1)
  • InterPro:IPR015947 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR018957 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR021991 (1)
  • InterPro:IPR029071 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50053 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS51015 (1)
  • Pfam:PF00097 (1)
  • Pfam:PF00240 (1)
  • Pfam:PF00628 (1)
  • Pfam:PF02182 (1)
  • Pfam:PF12148 (1)
  • EC:2.3.2.27 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA uhrf1-001 (1) 5079
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Ab1-uhrf1 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM uhrf1 No data available
    MARKER RELATIONSHIPS
    uhrf1Contained in: [BAC] CH211-124A3 (1) (order this)
    uhrf1Encodes: [EST] fb97f09
    [cDNA] MGC:63539 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213077 (1) 5099bp
    Genomic GenBank:BX927276 (1) 166844bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IAR5 (1) 776aa
    Sequence Clusters UniGene:77703 (1)
    Sequence Information (all 13)
    OTHER uhrf1 GENE PAGES
  • Gene:406350 (1)
  • VEGA:OTTDARG00000014587 (1)
  • Ensembl(GRCz10):ENSDARG00000103409 (1)
  • ORTHOLOGY for uhrf1 (Chr: 22)
    CITATIONS (38)