ZFIN ID: ZDB-GENE-040426-1923
Gene Name: heterogeneous nuclear ribonucleoprotein K, like
Gene Symbol: hnrpkl
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: wu:fc19f05, wu:fc48a08, wu:fc84b09, wu:fd16g02, zgc:56206

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and RNA binding activity; predicted to be involved in RNA processing and regulation of transcription by RNA polymerase II; predicted to localize to the viral  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56206]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fcc688Gt Transgenic Insertion Unknown Splicing Variant DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hnrpkl HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hnrpkl VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component viral nucleocapsid (more)
Molecular Function DNA binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004087 (1)
  • InterPro:IPR004088 (1)
  • InterPro:IPR012987 (1)
  • InterPro:IPR033090 (1)
  • InterPro:IPR036612 (1)
  • Pfam:PF00013 (1)
  • Pfam:PF08067 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA hnrpkl-003 (1) 528
    hnrpkl-004 (1) 711
    mRNA hnrpkl-203 (1) 2288
    aberrant processed transcript hnrpkl-204 (1) 1582
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hnrpkl No data available
    MARKER RELATIONSHIPS
    hnrpklContained in: [BAC] CH73-270F14 (1) (order this), DKEY-20J10 (1) (order this)
    hnrpklEncodes: [EST] fc19f05 (1), fc48a08, fc84b09 (1), fd16g02
    [cDNA] MGC:56206 (1) (order this), MGC:112225 (1), MGC:191907 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:BC096867 (1) 2290bp
    Genomic GenBank:BX323563 (1) 97393bp
    Select Tool
    Polypeptide UniProtKB:B8JLJ8 (1) 431aa
    Sequence Information (all 16)
    OTHER hnrpkl GENE PAGES
  • Alliance (1)
  • VEGA:OTTDARG00000029201 (1)
  • Ensembl(GRCz11):ENSDARG00000007034 (2)
  • ORTHOLOGY for hnrpkl (Chr: 5)
    CITATIONS (19)