ZFIN ID: ZDB-GENE-040426-1662
Gene Name: retinaldehyde binding protein 1a
Gene Symbol: rlbp1a
Sequence Ontology ID : SO:0000704

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Previous Names: cralbpb (1), rlbp1b (1), rlbp1l, zgc:73076

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have retinal binding activity; involved in optokinetic behavior; orthologous to human RLBP1 (retinaldehyde binding protein 1).
GENE EXPRESSION
All Expression Data: 15 figures from 5 publications
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2004 [MGC:73076]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la025799Tg Transgenic Insertion Unknown Unknown DNA
la025800Tg Transgenic Insertion Unknown Unknown DNA
sa20873 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH rlbp1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Bothnia retinal dystrophy Bothnia retinal dystrophy 607475
    fundus albipunctatus Fundus albipunctatus 136880
    Retinitis punctata albescens 136880
    Newfoundland cone-rod dystrophy Newfoundland rod-cone dystrophy 607476
    DISEASE ASSOCIATED WITH rlbp1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process optokinetic behavior (more)
    Molecular Function retinal binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001251 (1)
  • InterPro:IPR011074 (1)
  • InterPro:IPR032941 (1)
  • InterPro:IPR036273 (1)
  • InterPro:IPR036865 (1)
  • PROSITE:PS50191 (1)
  • Pfam:PF00650 (1)
  • Pfam:PF03765 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rlbp1a-202 (1) 1459
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rlbp1a No data available
    MARKER RELATIONSHIPS
    rlbp1aContained in: [BAC] DKEY-281A24 (1) (order this)
    rlbp1aEncodes: [cDNA] MGC:73076 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200705 (1) 1478bp
    Genomic GenBank:BX571799 159106bp
    Select Tool
    Polypeptide UniProtKB:F1QVD3 (1) 312aa
    Sequence Clusters UniGene:81557 (1)
    Sequence Information (all 14)
    OTHER rlbp1a GENE PAGES
  • Alliance (1)
  • Gene:393678 (1)
  • VEGA:OTTDARG00000043580 (1)
  • Ensembl(GRCz11):ENSDARG00000012504 (2)
  • ORTHOLOGY for rlbp1a (Chr: 7)
    CITATIONS (29)