Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1524
Gene Name: solute carrier family 5 (sodium/glucose cotransporter), member 1
Gene Symbol: slc5a1
Previous Names: SGLT1 (1), zgc:66074, zgc:85782
Location: Chr: 10   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2004 [MGC:85782]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  intestinal bulb, pronephric duct, pronephric proximal convoluted tubule, pronephric proximal straight tubule
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa12741, sa13706
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Glucose/galactose malabsorption 606824
GENE ONTOLOGY
Ontology GO Term
Biological Process transmembrane transport (more)
Cellular Component integral component of membrane (more)
Molecular Function transporter activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001734 (1)
  • InterPro:IPR018212 (1)
  • InterPro:IPR019900 (1)
  • PROSITE:PS00456 (1)
  • PROSITE:PS50283 (1)
  • Pfam:PF00474 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc5a1-001 (1) 2655
    ncRNA slc5a1-002 (1) 941
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM slc5a1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    slc5a1 Contained in: [BAC] DKEY-106L3 (1)
    slc5a1 Encodes: [cDNA] MGC:66074 (1) (order this), MGC:85782 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200681 (1) 2700 bp
    Genomic GenBank:BX324123 (1) 158061 bp
    Select Tool
    Polypeptide UniProtKB:F1QBX6 (1) 678 aa
    Sequence Clusters UniGene:87868 (1)
    Sequence Information (all 14)
    OTHER slc5a1 GENE PAGES
  • Gene:393654 (1)
  • VEGA:OTTDARG00000022109 (1)
  • Ensembl(Zv9):ENSDARG00000013871 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish slc5a1 10  
    Human SLC5A1 22 (22q12.3)
  • OMIM:182380
  • Gene:6523
  • Mouse Slc5a1 5 ( 17.46 cM)
  • MGI:107678
  • Gene:20537
  • Orthology Details
    CITATIONS (21)