ZFIN ID: ZDB-GENE-040426-1524
Gene Name: solute carrier family 5 (sodium/glucose cotransporter), member 1
Gene Symbol: slc5a1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: SGLT1 (1), zgc:66074, zgc:85782

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 12 figures from 5 publications
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2004 [MGC:85782]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH slc5a1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Glucose/galactose malabsorption 606824
GENE ONTOLOGY
Ontology GO Term
Biological Process transmembrane transport (more)
Cellular Component integral component of membrane (more)
Molecular Function transmembrane transporter activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001734 (1)
  • InterPro:IPR018212 (1)
  • InterPro:IPR038377 (1)
  • PROSITE:PS00456 (1)
  • PROSITE:PS50283 (1)
  • Pfam:PF00474 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc5a1-001 (1) 2655
    ncRNA slc5a1-002 (1) 941
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc5a1 No data available
    MARKER RELATIONSHIPS
    slc5a1Contained in: [BAC] DKEY-106L3 (1) (order this)
    slc5a1Encodes: [cDNA] MGC:66074 (1) (order this), MGC:85782 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200681 (1) 2700bp
    Genomic GenBank:BX324123 (1) 158061bp
    Select Tool
    Polypeptide UniProtKB:F1QBX6 (1) 678aa
    Sequence Clusters UniGene:87868 (1)
    Sequence Information (all 14)
    OTHER slc5a1 GENE PAGES
  • Alliance (1)
  • Gene:393654 (1)
  • VEGA:OTTDARG00000022109 (1)
  • Ensembl(GRCz10):ENSDARG00000013871 (1)
  • ORTHOLOGY for slc5a1 (Chr: 10)
    CITATIONS (29)