ZFIN ID: ZDB-GENE-040426-1315
Gene Name: hypoxia inducible factor 1 subunit alpha, like
Gene Symbol: hif1al
Sequence Ontology ID : SO:0000704

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Previous Names: hif-3 (1), Hif3a (1), zgc:63965

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits beta-catenin binding activity and transcription regulatory region sequence-specific DNA binding activity; involved in several processes, including eye development, neuron apoptotic process,  ...
GENE EXPRESSION
All Expression Data: 11 figures from 9 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63965]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb20180620 Small Deletion Unknown Unknown CRISPR
ihb20180621 Insertion Unknown Unknown CRISPR
mi600 Small Deletion Exon 11 Unknown CRISPR
mi601 Small Deletion Unknown Unknown CRISPR
sa18426 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45539 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from Zhang et al., 2016
    Observed in:
    DISEASE ASSOCIATED WITH hif1al HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hif1al VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component beta-catenin-TCF complex (more)
    Molecular Function beta-catenin binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000014 (1)
  • InterPro:IPR001067 (1)
  • InterPro:IPR001610 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR013767 (1)
  • InterPro:IPR021537 (1)
  • InterPro:IPR035965 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50112 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00989 (1)
  • Pfam:PF11413 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hif1al-201 (1) 900
    hif1al-203 (1) 3185
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hif1al No data available
    MARKER RELATIONSHIPS
    hif1alContained in: [BAC] CH211-169I9 (1) (order this), DKEY-54N8 (1) (order this)
    hif1alEncodes: [cDNA] MGC:63965 (1) (order this), MGC:174046 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200405 (1) 3197bp
    Genomic GenBank:CU856359 (1) 216188bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IBR4 (1) 626aa
    Sequence Clusters UniGene:11978 (1)
    Sequence Information (all 39)
    OTHER hif1al GENE PAGES
  • Alliance (1)
  • Gene:393376 (1)
  • VEGA:OTTDARG00000020762 (1)
  • Ensembl(GRCz11):ENSDARG00000100826 (1)
  • ORTHOLOGY for hif1al (Chr: 15)
    CITATIONS (40)