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ZIRC
ZFIN ID: ZDB-GENE-040120-7
Gene Name: actin related protein 2/3 complex, subunit 5B
Gene Symbol: arpc5b
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have actin filament binding activity; predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration; predicted to localize to the Arp2/3 protein complex and  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7139057]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arpc5b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH arpc5b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process Arp2/3 complex-mediated actin nucleation (more)
Cellular Component actin cytoskeleton (more)
Molecular Function actin filament binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006789 (1)
  • InterPro:IPR036743 (1)
  • Pfam:PF04699 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arpc5b-202 (1) 1630
    arpc5b-203 (1) 890
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arpc5b No data available
    MARKER RELATIONSHIPS
    arpc5bContained in: [BAC] CH211-169J21 (1) (order this)
    arpc5bEncodes: [EST] IMAGE:7139057 (1) (order this)
    [cDNA] MGC:56358 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201509 (1) 1705bp
    Genomic GenBank:BX248238 (1) 158302bp
    Select Tool
    Polypeptide UniProtKB:Q7ZWH4 (1) 150aa
    Sequence Clusters UniGene:10390 (1)
    Sequence Information (all 13)
    ORTHOLOGY for arpc5b (Chr: 20)
    CITATIONS (26)