ZFIN ID: ZDB-GENE-040120-7
Gene Name: actin related protein 2/3 complex, subunit 5B
Gene Symbol: arpc5b    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration. Predicted to localize to Arp2/3 protein complex and cytoplasm. Orthologous to human ARPC5 (actin related protein 2/3 complex subunit 5).
Genome Resources: Alliance (1),  Gene:399482 (1),  Ensembl(GRCz11):ENSDARG00000019062 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7139057]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arpc5b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH arpc5b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process Arp2/3 complex-mediated actin nucleation (more)
Cellular Component actin cytoskeleton (more)
Molecular Function actin filament binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arpc5b-202 (1)    Ensembl 1630
arpc5b-203 (1)    Ensembl 890
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arpc5b No data available
MARKER RELATIONSHIPS
arpc5b Contained in: [BAC] CH211-169J21 (1)
arpc5b Encodes: [EST] IMAGE:7139057 (1)
[cDNA] MGC:56358 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_201509 (1) 1705 nt
Genomic GenBank:BX248238 (1) 158302 nt
Select Tool
Polypeptide UniProtKB:Q7ZWH4 (1) 150 aa
Sequence Information (all 12)
ORTHOLOGY for arpc5b ( Chr: 20 )
CITATIONS (28)