ZFIN ID: ZDB-GENE-031113-10
Gene Name: DEAD (Asp-Glu-Ala-Asp) box helicase 21
Gene Symbol: ddx21    Nomenclature History

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Previous Names: cb960 (1), wu:fi30c07, wu:fi34d08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have RNA binding activity and RNA helicase activity. Predicted to localize to nucleolus. Is expressed in several structures, including alar plate midbrain region; digestive system; musculature system; nervous system; and segmental plate. Orthologous to several human genes including DDX21 (DExD-box helicase 21).
Genome Resources: Alliance (1),  Gene:799650 (1),  Ensembl(GRCz11):ENSDARG00000063626 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35386 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ddx21 N/A 2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ddx21 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ddx21 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleus (more)
    Molecular Function ATP binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ddx21-202 (1)    Ensembl 422
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ddx21 No data available
    MARKER RELATIONSHIPS
    ddx21 Contained in: [Fosmid] ZFOS-1762D12 (1)
    ddx21 Encodes: [EST] cb960 (1) (order this), fi30c07, fi34d08
    [cDNA] MGC:172237 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001127335 (1) 2514 nt
    Genomic GenBank:CU694274 (1) 41491 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R9YJN8 (1) 791 aa
    Sequence Information (all 21)
    ORTHOLOGY for ddx21 ( Chr: 13 )
    CITATIONS (23)