ZFIN ID: ZDB-GENE-031112-7
Gene Name: adenomatous polyposis coli
Gene Symbol: apc
Previous Names: cb965 (1), im:7150932, im:7152872
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 17 figures from 3 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [IMAGE:7150932]
  6 figures (7 images) from Thisse et al., 2004 [IMAGE:7152872]
  5 figures (9 images) from Thisse et al., 2001 [cb965]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
  basal plate midbrain region, central nervous system, cranial ganglion, diencephalon (all 17) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu745 Point Mutation Unknown Unknown ENU
sa61 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa9511 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12033 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • zf134 Point Mutation Unknown Unknown
    Targeting reagents: MO1-apc (1), MO2-apc (1)
    PHENOTYPE
    Data: 56 figures from 20 publications
    Observed in: anterior commissure, anterior/posterior axis specification, apoptotic process, atrioventricular canal (all 100) expand
    DISEASE ASSOCIATED WITH apc HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    colon carcinoma Colorectal cancer, somatic 114500
    colorectal cancer Colorectal cancer, somatic 114500
    familial adenomatous polyposis Adenomatous polyposis coli 175100
    Brain tumor-polyposis syndrome 2 175100
    Gardner syndrome 175100
    hepatocellular carcinoma Hepatoblastoma, somatic 114550
    stomach cancer Gastric cancer, somatic 613659
    Adenoma, periampullary, somatic
    Desmoid disease, hereditary 135290
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Wnt signaling pathway involved in somitogenesis (more)
    Cellular Component beta-catenin destruction complex (more)
    Molecular Function beta-catenin binding (more)
    GO Terms (all 59)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000225 (1)
  • InterPro:IPR009223 (1)
  • InterPro:IPR009224 (1)
  • InterPro:IPR009232 (1)
  • InterPro:IPR009234 (1)
  • InterPro:IPR009240 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR026818 (1)
  • InterPro:IPR026831 (1)
  • InterPro:IPR026836 (1)
  • InterPro:IPR032038 (1)
  • PROSITE:PS50176 (1)
  • Pfam:PF00514 (1)
  • Pfam:PF05923 (1)
  • Pfam:PF05924 (1)
  • Pfam:PF05937 (1)
  • Pfam:PF05956 (1)
  • Pfam:PF05972 (1)
  • Pfam:PF16689 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA apc-001 (1) 9187
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM apc No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    apcContained in: [BAC] CH73-238M11 (1) (order this)
    [Fosmid] CH1073-190G7 (1) (order this)
    apcEncodes: [EST] cb965 (1) (order this), IMAGE:7150932 (1) (order this), IMAGE:7152872 (1) (order this)
    [STS] zfish44906-1822h03.q1k
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001143840 (1) 9214bp
    Genomic GenBank:CU861476 (1) 86052bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IWH7 (1) 2754aa
    Sequence Clusters UniGene:160758 (1)
    Sequence Information (all 22)
    OTHER apc GENE PAGES
  • Gene:386762 (1)
  • VEGA:OTTDARG00000035536 (1)
  • Ensembl(GRCz10):ENSDARG00000058868 (1)
  • ORTHOLOGY for apc (Chr: 10)
    Species Symbol Chromosome Accession # Evidence
    Human APC 5
  • Gene:324
  • OMIM:611731
  • HGNC:583
  • Amino acid sequence comparison (1)
    Mouse Apc 18
  • MGI:88039
  • Gene:11789
  • Amino acid sequence comparison (1)
    Download Curated Orthology
    CITATIONS (62)