Gene

cxxc1b

ID
ZDB-GENE-030728-4
Name
CXXC finger protein 1b
Symbol
cxxc1b Nomenclature History
Previous Names
  • cfp1 (1)
  • cxxc1
  • LWS-2 (1)
  • opn1lw2 (1)
  • zgc:55527
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have DNA binding activity and zinc ion binding activity. Involved in DNA methylation on cytosine; blood vessel development; and hemopoiesis. Predicted to localize to Set1C/COMPASS complex. Is expressed in retinal cone cell and retinal photoreceptor layer. Orthologous to human CXXC1 (CXXC finger protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cxxc1b Human Ortholog
No data available
Associated With cxxc1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019786 Zinc finger, PHD-type, conserved site
Domain IPR001965 Zinc finger, PHD-type
Domain IPR002857 Zinc finger, CXXC-type
Domain IPR019787 Zinc finger, PHD-finger
Domain IPR022056 CpG binding protein, C-terminal
Family IPR037869 Spp1/CFP1
Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Domain Details Per Protein
Protein Length CpG binding protein, C-terminal Spp1/CFP1 Zinc finger, CXXC-type Zinc finger, FYVE/PHD-type Zinc finger, PHD-finger Zinc finger, PHD-type Zinc finger, PHD-type, conserved site Zinc finger, RING/FYVE/PHD-type
UniProtKB:Q7SZX6 563
UniProtKB:Q7SZE4 563
UniProtKB:B2GRZ6 563
UniProtKB:F1QXL1 563
UniProtKB:A0A2R8QJK2 541
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations