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ZIRC
ZFIN ID: ZDB-GENE-030728-4
Gene Name: CXXC finger protein 1b
Gene Symbol: cxxc1b
Sequence Ontology ID : SO:0001217

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Previous Names: cfp1 (1), cxxc1, LWS-2 (1), opn1lw2 (1), zgc:55527

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and zinc ion binding activity. Involved in DNA methylation on cytosine; blood vessel development; and hemopoiesis. Predicted to localize to the Set1C/COMPASS  ...
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55527]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017801Tg Transgenic Insertion Unknown Unknown DNA
Targeting reagents:
DISEASE ASSOCIATED WITH cxxc1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cxxc1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process blood vessel development (more)
Cellular Component Set1C/COMPASS complex (more)
Molecular Function DNA binding (more)
GO Terms (all 8)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA cxxc1b-002 (1) 497
mRNA cxxc1b-201 (1) 2020
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
MARKER RELATIONSHIPS
cxxc1b Contained in: [BAC] DKEY-13A21 (order this), DKEY-245F22 (1) (order this)
cxxc1b Encodes: [cDNA] MGC:55527 (1) (order this), MGC:192407 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200333 (1) 2005 bp
Genomic GenBank:AL844847 235174 bp Blast at MegaBLAST
Polypeptide UniProtKB:B2GRZ6 (1) 563 aa
Sequence Clusters UniGene:11991 (1)
Sequence Information (all 19)
ORTHOLOGY for cxxc1b ( Chr: 11 )
CITATIONS (28)