ZFIN ID: ZDB-GENE-030616-81
Gene Name: nuclear receptor corepressor 2
Gene Symbol: ncor2
Sequence Ontology ID : SO:0000704

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Previous Names: gb:be017685, si:bz71m17.2, smrt (1)

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 12 figures from 4 publications
Directly Submitted Expression Data: 7 figures (18 images) from Thisse et al., 2008 [be017685]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029488Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1781 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7154 Point Mutation Unknown Premature Stop ENU
    sa11868 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12530 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13457 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14103 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15101 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15996 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21361 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21362 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34466 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34467 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34468 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38706 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41278 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41279 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 7 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH ncor2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ncor2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process hematopoietic stem cell differentiation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001005 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017884 (1)
  • InterPro:IPR031557 (1)
  • PROSITE:PS51293 (1)
  • Pfam:PF00249 (1)
  • Pfam:PF15784 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ncor2-001 (1) 6325
    ncor2-002 (1) 6295
    ncRNA ncor2-003 (1) 539
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ncor2 No data available
    MARKER RELATIONSHIPS
    ncor2Contained in: [BAC] RP71-71M17 (1) (order this)
    ncor2Encodes: [EST] be017685 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007032 (1)
    Genomic GenBank:AL590153 (1) 133947bp
    Select Tool
    Polypeptide UniProtKB:E7FF48 (1) 2315aa
    Sequence Clusters UniGene:20593 (1)
    Sequence Information (all 37)
    OTHER ncor2 GENE PAGES
  • Alliance (1)
  • Gene:561503 (1)
  • VEGA:OTTDARG00000001376 (1)
  • Ensembl(GRCz11):ENSDARG00000000966 (2)
  • ORTHOLOGY for ncor2 (Chr: 8)
    CITATIONS (41)