ZFIN ID: ZDB-GENE-030616-511
Gene Name: ATP-binding cassette, sub-family C (CFTR/MRP), member 4
Gene Symbol: abcc4
Sequence Ontology ID : SO:0000704

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Previous Names: cb1019 (1), leakytail (1), lkt (1), sb:eu668, sb:eu872, si:busm1-52i16.4, si:dz202l16.5, si:dz52i16.4

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 10 figures from 4 publications
Directly Submitted Expression Data: 5 figures (12 images) from Thisse et al., 2001 [cb1019]
  1 figure (1 image) from Thisse et al., 2005 [eu668]
  1 figure (1 image) from Thisse et al., 2005 [eu872]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16292 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20625 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38538 Point Mutation Unknown Splice Site ENU
    zf560 Point Mutation Exon 17 Unknown
    Targeting reagents:
    PHENOTYPE
    Data: 4 figures from Jin et al., 2014
    Observed in:
    DISEASE ASSOCIATED WITH abcc4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH abcc4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process detoxification (more)
    Cellular Component plasma membrane (more)
    Molecular Function efflux transmembrane transporter activity (more)
    GO Terms (all 14)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003439 (1)
  • InterPro:IPR003593 (1)
  • InterPro:IPR009147 (1)
  • InterPro:IPR011527 (1)
  • InterPro:IPR017871 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR030240 (1)
  • InterPro:IPR036640 (1)
  • PROSITE:PS00211 (1)
  • PROSITE:PS50893 (1)
  • PROSITE:PS50929 (1)
  • Pfam:PF00005 (1)
  • Pfam:PF00664 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abcc4-001 (1) 5517
    ottdart00000054397 (1) 4305
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM abcc4 No data available
    MARKER RELATIONSHIPS
    abcc4Contained in: [BAC] CH211-181L5 (1) (order this), CH211-241A17 (1) (order this)
    [PAC] BUSM1-52I16 (1) (order this), BUSM1-202L16 (order this), BUSM1-228E24 (1) (order this)
    abcc4Encodes: [EST] cb1019 (1) (order this), eu668 (1), eu872 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007038 (1) 5517bp
    Genomic GenBank:AL953886 (1) 154152bp
    Select Tool
    Polypeptide UniProtKB:B2LUM7 (1) 1327aa
    Sequence Clusters UniGene:132933 (1)
    Sequence Information (all 26)
    OTHER abcc4 GENE PAGES
  • Alliance (1)
  • Gene:368620 (1)
  • VEGA:OTTDARG00000003695 (1)
  • VEGA:OTTDARG00000037991 (1)
  • ORTHOLOGY for abcc4 (Chr: 6)
    CITATIONS (35)