ZFIN ID: ZDB-GENE-030616-151
Gene Name: MIS18 binding protein 1
Gene Symbol: mis18bp1    Nomenclature History

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Previous Names: si:busm1-142b24.1 (1), si:dkey-11j8.1, si:dz142b24.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to localize to the condensed nuclear chromosome kinetochore. Orthologous to human MIS18BP1 (MIS18 binding protein 1).
Genome Resources: Alliance (1),  Gene:368727 (1),  Ensembl(GRCz11):ENSDARG00000042563 (2)
Note: novel protein similar to human hypothetical protein FLJ11186; this gene corresponds to ENSDARG00000042563
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12149 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42951 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-mis18bp1 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mis18bp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH mis18bp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001005 SANT/Myb domain
    Domain IPR015216 SANT associated
    Domain IPR017884 SANT domain
    Family IPR039110 KNL2-like
    Homologous_superfamily IPR009057 Homeobox-like domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA mis18bp1-201 (1)    Ensembl 3954
    mis18bp1-202 (1)    Ensembl 4010
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM mis18bp1 No data available
    MARKER RELATIONSHIPS
    mis18bp1 Contained in: [BAC] DKEY-11J8 (1) (order this)
    [PAC] BUSM1-142B24 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001006661 (1) 3576 nt
    Genomic GenBank:BX465838 (1) 229940 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1RAN4 (1) 1124 aa
    Sequence Information (all 16)
    ORTHOLOGY for mis18bp1 ( Chr: 17 )
    CITATIONS (20)