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ZIRC
ZFIN ID: ZDB-GENE-030326-6
Gene Name: snail family zinc finger 2
Gene Symbol: snai2
Sequence Ontology ID : SO:0001217

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Previous Names: cb147 (1), cb355 (1), id:ibd5003, sb:cb355, sb:cb569, slug (1), wu:fb83e12, wu:fd19g11, zgc:92564

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to the nucleus.  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24539 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sd57 Small Deletion Unknown Unknown CRISPR
    Targeting reagents:
    DISEASE ASSOCIATED WITH snai2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    piebaldism Piebaldism 172800
    Waardenburg syndrome type 2D Waardenburg syndrome, type 2D 608890
    DISEASE ASSOCIATED WITH snai2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA snai2-201 (1) 2992
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snai2 No data available
    MARKER RELATIONSHIPS
    snai2 Contained in: [BAC] CH211-106J11 (1) (order this)
    snai2 Encodes: [EST] cb147 (1) (order this), cb355 (1) (order this), cb569 (1) (order this), fb83e12, fd19g11 (1), ibd5003 (order this)
    [cDNA] MGC:92564 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008581 (1) 3005 bp
    Genomic GenBank:CR354603 (1) 159582 bp
    Select Tool
    Polypeptide UniProtKB:Q5PQY5 (1) 257 aa
    Sequence Clusters UniGene:75349 (1)
    Sequence Information (all 21)
    ORTHOLOGY for snai2 ( Chr: 24 )
    CITATIONS (50)