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General Information
ZIRC
ZFIN ID: ZDB-GENE-030219-92
Gene Name: zic family member 2 (odd-paired homolog, Drosophila) b
Gene Symbol: zic2b
Sequence Ontology ID : SO:0001217

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Previous Names: zic2.2 (1), zic2l, hm:zeh0655, id:ibd5017

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in animal organ  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028121Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028122Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32696 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • uw1116 Insertion Unknown Frameshift CRISPR
    uw1127 Insertion Unknown Unknown CRISPR
    uwt104 Small Deletion Unknown Frameshift TALEN
    Targeting reagents:
    DISEASE ASSOCIATED WITH zic2b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    holoprosencephaly 5 Holoprosencephaly 5 609637
    DISEASE ASSOCIATED WITH zic2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell proliferation in midbrain (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA zic2b-002 (1) 693
    mRNA zic2b-201 (1) 2248
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zic2b No data available
    MARKER RELATIONSHIPS
    zic2b Contained in: [BAC] DKEY-256M19 (1) (order this)
    zic2b Contains: [SNP] rs3727533 (1), rs3727534 (1)
    zic2b Encodes: [EST] ibd5017 (order this), zeh0655
    [cDNA] MGC:110428 (1) (order this), MGC:198352 (1) (order this), MGC:198356 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001820 (1) 2239 bp
    Genomic GenBank:BX088652 (1) 161341 bp
    Select Tool
    Polypeptide UniProtKB:Q9DE40 (1) 427 aa
    Sequence Clusters UniGene:76511 (1)
    Sequence Information (all 24)
    ORTHOLOGY for zic2b ( Chr: 1 )
    CITATIONS (47)