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ZIRC
ZFIN ID: ZDB-GENE-030131-9827
Gene Name: DEP domain containing 1a
Gene Symbol: depdc1a    Nomenclature History

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Previous Names: cb41 (1), sb:cb41, wu:fc05g03, zgc:55374

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have GTPase activator activity. Predicted to be involved in intracellular signal transduction. Is expressed in nervous system; pectoral fin musculature; pharyngeal arch 3-7 skeleton; and proliferative region. Orthologous to human DEPDC1 (DEP domain containing 1).
Genome Resources: Alliance (1),  Gene:100003959 (1),  Ensembl(GRCz11):ENSDARG00000018165 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2458 Point Mutation Unknown Splice Site ENU
sa13687 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16447 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18914 Point Mutation Unknown Splice Site ENU
    sa21241 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34360 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41162 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-depdc1a N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH depdc1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH depdc1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intracellular signal transduction (more)
    Molecular Function GTPase activator activity (more)
    GO Terms (all 3)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA depdc1a-201 (1)    Ensembl 3393
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM depdc1a No data available
    MARKER RELATIONSHIPS
    depdc1a Contained in: [BAC] CH211-198N5 (1) (order this)
    depdc1a Encodes: [EST] cb41 (1) (order this), fc05g03
    [cDNA] MGC:55374 (1) (order this), MGC:198323 (1) (order this), MGC:198351 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198872 (1) 2957 bp
    Genomic GenBank:CR759968 (1) 182233 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q8V6 (1) 800 aa
    Sequence Clusters UniGene:78376 (1)
    Sequence Information (all 29)
    ORTHOLOGY for depdc1a ( Chr: 8 )
    CITATIONS (21)