ZFIN ID: ZDB-GENE-030131-9112
Gene Name: NBR1 autophagy cargo receptor a
Gene Symbol: nbr1a    Nomenclature History

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Previous Names: nbr1, fa99f08, wu:fa99f08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have ubiquitin binding activity. Predicted to be involved in macroautophagy. Predicted to localize to the autophagosome and phagophore assembly site. Orthologous to human NBR1 (NBR1 autophagy cargo receptor).
Genome Resources: Alliance (1),  Gene:337168 (1),  Ensembl(GRCz11):ENSDARG00000077297 (2)
GENE EXPRESSION No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nbr1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nbr1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process macroautophagy (more)
Cellular Component phagophore assembly site (more)
Molecular Function ubiquitin binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000270 PB1 domain
Domain IPR032350 Next to BRCA1, central domain
Homologous_superfamily IPR009060 UBA-like superfamily
Homologous_superfamily IPR013783 Immunoglobulin-like fold
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA nbr1a-201 (1)    Ensembl 4136
ncRNA nbr1-002 (1)    Ensembl 4359
nbr1-003 (1)    Ensembl 454
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM nbr1a No data available
MARKER RELATIONSHIPS
nbr1a Contained in: [BAC] DKEY-11C5 (order this)
nbr1a Encodes: [EST] fa99f08
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001305595 (1)
Genomic GenBank:BX001014 (1) 193523 nt
Select Tool
Polypeptide UniProtKB:E9QEG9 (1) 989 aa
Sequence Information (all 16)
ORTHOLOGY for nbr1a ( Chr: 12 )
CITATIONS (14)