ZFIN ID: ZDB-GENE-030131-9075
Gene Name: core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b
Gene Symbol: c1galt1b
Sequence Ontology ID : SO:0000704

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Previous Names: c1galt1, fa98f05, wu:fa98f05, zgc:66485 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity; predicted to be involved in O-glycan processing, core 1, angiogenesis, and kidney development; predicted to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:66485]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH c1galt1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH c1galt1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process angiogenesis (more)
Cellular Component integral component of membrane (more)
Molecular Function glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003378 (1)
  • Pfam:PF02434 (1)
  • EC:2.4.1.122 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA c1galt1b-201 (1) 2016
    c1galt1b-202 (1) 791
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM c1galt1b No data available
    MARKER RELATIONSHIPS
    c1galt1bContained in: [BAC] DKEY-195M11 (1) (order this), DKEYP-41G7 (1)
    c1galt1bEncodes: [EST] fa98f05
    [cDNA] MGC:66485 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200051 (1) 1723bp
    Genomic GenBank:CR753817 (1) 236737bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QJQ5 (1) 374aa
    Sequence Clusters UniGene:6223 (1)
    Sequence Information (all 15)
    OTHER c1galt1b GENE PAGES
  • Alliance (1)
  • Gene:337131 (1)
  • VEGA:OTTDARG00000019887 (1)
  • ORTHOLOGY for c1galt1b (Chr: 6)
    CITATIONS (20)