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ZIRC
ZFIN ID: ZDB-GENE-030131-8576
Gene Name: autophagy related 3
Gene Symbol: atg3
Sequence Ontology ID : SO:0000704

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Previous Names: apg3, apg3l, im:6910145, wu:fb15g12, zgc:64156 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Atg12 transferase activity and Atg8 ligase activity; predicted to be involved in autophagosome assembly, autophagy of mitochondrion, and mitochondrial fragmentation involved in  ...
GENE EXPRESSION
All Expression Data: 7 figures from 4 publications
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2004 [MGC:64156]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015987Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atg3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atg3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process autophagosome assembly (more)
    Cellular Component cytoplasm (more)
    Molecular Function Atg12 transferase activity (more)
    GO Terms (all 12)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atg3-201 (1) 1706
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atg3 No data available
    MARKER RELATIONSHIPS
    atg3Contained in: [BAC] CH211-237C6 (1) (order this)
    atg3Encodes: [EST] fb15g12, IMAGE:6910145 (1) (order this)
    [cDNA] MGC:64156 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200022 (1) 1666bp
    Genomic GenBank:CU655960 (1) 153771bp
    Select Tool
    Polypeptide UniProtKB:Q6PFS7 (1) 317aa
    Sequence Clusters UniGene:1496 (1)
    Sequence Information (all 14)
    ORTHOLOGY for atg3 (Chr: 6)
    CITATIONS (31)