ZFIN ID: ZDB-GENE-030131-7951
Gene Name: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
Gene Symbol: rcbtb1    Nomenclature History

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Previous Names: fj43a07, wu:fj43a07, zgc:56037 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Involved in blood vessel development and retina vasculature development in camera-type eye. Orthologous to human RCBTB1 (RCC1 and BTB domain containing protein 1).
Genome Resources: Alliance (1),  Gene:336007 (1),  Ensembl(GRCz11):ENSDARG00000036645 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56037]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16057 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19559 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32747 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko907a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko907b Small Deletion Unknown Unknown CRISPR
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-rcbtb1
    1
    CRISPR2-rcbtb1
    1
    MO1-rcbtb1 N/A 1
    MO2-rcbtb1 N/A 1
    DISEASE ASSOCIATED WITH rcbtb1 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Retinal dystrophy with or without extraocular anomalies 617175
    DISEASE ASSOCIATED WITH rcbtb1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retina vasculature development in camera-type eye (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rcbtb1-201 (1)    Ensembl 2750
    rcbtb1-202 (1)    Ensembl 801
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rcbtb1 No data available
    MARKER RELATIONSHIPS
    rcbtb1 Contained in: [BAC] DKEY-7A20 (1) (order this)
    rcbtb1 Encodes: [EST] fj43a07
    [cDNA] MGC:56037 (1), MGC:192799 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199991 (1) 2771 nt
    Genomic GenBank:BX294379 (1) 214290 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B8A4R1 (1) 531 aa
    Sequence Information (all 17)
    ORTHOLOGY for rcbtb1 ( Chr: 1 )
    CITATIONS (21)