ZFIN ID: ZDB-GENE-030131-7591
Gene Name: retinol binding protein 4, like
Gene Symbol: rbp4l    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: purpurin (1), wu:fk53a11, zgc:73163

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have retinoid binding activity and retinol transmembrane transporter activity. Involved in retina development in camera-type eye. Is expressed in neural crest; visual system; and yolk syncytial layer.
Genome Resources: Alliance (1),  Gene:335651 (1),  Ensembl(GRCz11):ENSDARG00000044684 (2)
GENE EXPRESSION
All Expression Data: 12 figures from 4 publications
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2004 [MGC:73163]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44965 Point Mutation Unknown Unknown ENU
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-rbp4l N/A 1
MO2-rbp4l N/A 1
DISEASE ASSOCIATED WITH rbp4l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rbp4l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process retina development in camera-type eye (more)
Molecular Function retinoid binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000566 Lipocalin/cytosolic fatty-acid binding domain
Family IPR002449 Retinol binding protein/Purpurin
Homologous_superfamily IPR012674 Calycin
Family IPR022271 Lipocalin, ApoD type
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA rbp4l-201 (1)    Ensembl 1459
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-rbp4l polyclonal IgG Rabbit IHC 2
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM rbp4l No data available
MARKER RELATIONSHIPS
rbp4l Contained in: [BAC] DKEY-30K6 (1) (order this)
rbp4l Encodes: [EST] fk53a11
[cDNA] MGC:73163 (1), MGC:173979 (1), MGC:173980 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_199965 (1) 854 bp
Genomic GenBank:AL844141 (1) 257634 bp Blast at MegaBLAST
Polypeptide UniProtKB:A7MCJ8 (1) 196 aa
Sequence Information (all 23)
ORTHOLOGY for rbp4l ( Chr: 21 )
CITATIONS (24)