ZFIN ID: ZDB-GENE-030131-666
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Gene Name: proteasome 26S subunit, ATPase 3
Gene Symbol: psmc3
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fb39a02, zgc:86713 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity and proteasome-activating ATPase activity; predicted to be involved in positive regulation of RNA polymerase II transcriptional preinitiation complex assembly;  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6896890]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40961 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH psmc3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH psmc3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein catabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003593 (1)
  • InterPro:IPR003959 (1)
  • InterPro:IPR003960 (1)
  • InterPro:IPR005937 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR032501 (1)
  • InterPro:IPR035254 (1)
  • InterPro:IPR041569 (1)
    		•
  • PROSITE:PS00674 (1)
    		•
  • Pfam:PF00004 (1)
  • Pfam:PF16450 (1)
  • Pfam:PF17862 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA psmc3-201 (1) 1811
    Select Tool
    psmc3-202 (1) 1554
    Select Tool
    aberrant processed transcript psmc3-203 (1) 508
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM psmc3 No data available
    MARKER RELATIONSHIPS
    psmc3Contained in: [BAC] DKEY-150L7 (1) (order this)
    psmc3Encodes: [EST] fb39a02, IMAGE:6896890 (1) (order this)
    [cDNA] MGC:86713 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002064 (1) 1657bp
    Select Tool
    Genomic GenBank:BX957297 (1) 79980bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ILA8 (1) 427aa
    Select Tool
    Sequence Clusters UniGene:31059 (1)
    Sequence Information (all 20)
    OTHER psmc3 GENE PAGES
  • Alliance (1)
  • Gene:321947 (1)
  • VEGA:OTTDARG00000041455 (1)
  • Ensembl(GRCz11):ENSDARG00000007141 (2)
    • ORTHOLOGY for psmc3 (Chr: 7)
    CITATIONS (25)