ZFIN ID: ZDB-GENE-030131-6502
Gene Name: glutamate receptor, ionotropic, kainate 1a
Gene Symbol: grik1a    Nomenclature History

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Previous Names: grik1, fv36b03, wu:fv36b03

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have kainate selective glutamate receptor activity and transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in glutamatergic synaptic transmission and modulation of chemical synaptic transmission. Predicted to localize to kainate selective glutamate receptor complex; postsynaptic density membrane; and presynaptic membrane. Human ortholog(s) of this gene implicated in childhood absence epilepsy. Orthologous to human GRIK1 (glutamate ionotropic receptor kainate type subunit 1).
Genome Resources: Alliance (1),  Gene:798001 (1),  Ensembl(GRCz11):ENSDARG00000069139 (2)
GENE EXPRESSION
All Expression Data: Fig. 5 from Sheets, 2017
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017477Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH grik1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH grik1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ion transport (more)
Cellular Component cell junction (more)
Molecular Function ion channel activity (more)
GO Terms (all 15)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA grik1a-202 (1)    Ensembl 747
grik1a-205 (1)    Ensembl 3192
ncRNA grik1a-002 (1)    Ensembl 600
grik1a-004 (1)    Ensembl 756
grik1a-005 (1)    Ensembl 752
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM grik1a No data available
MARKER RELATIONSHIPS
grik1a Contained in: [BAC] DKEY-38P6 (1) (order this), DKEY-50P8 (1) (order this), DKEY-76A19 (1) (order this)
grik1a Encodes: [EST] fv36b03
grik1a Has Artifact: [cDNA] MGC:158326
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_001924003 (1) 3178 nt
Genomic GenBank:AL837524 (1) 202158 nt Blast at MegaBLAST
Polypeptide UniProtKB:E9QGN5 (1) 904 aa
Sequence Information (all 34)
ORTHOLOGY for grik1a ( Chr: 10 )
CITATIONS (24)